The automated learning of machines characterizes machine learning (ML). It focuses on making data-driven predictions using programmed algorithms. ML has several applications, including bioinformatics, which is a discipline of study and practice that deals with applying computational derivations to obtain biological data. It involves the collection, retrieval, storage, manipulation, and modeling of data for analysis or prediction made using customized software. Previously, comprehensive programming of bioinformatical algorithms was an extremely laborious task for such applications as predicting protein structures. Now, algorithms using ML and deep learning (DL) have increased the speed and efficacy of programming such algorithms. Applications of Machine Learning and Deep Learning on Biological Data is an examination of applying ML and DL to such areas as proteomics, genomics, microarrays, text mining, and systems biology. The key objective is to cover ML applications to biological science problems, focusing on problems related to bioinformatics. The book looks at cutting-edge research topics and methodologies in ML applied to the rapidly advancing discipline of bioinformatics. ML and DL applied to biological and neuroimaging data can open new frontiers for biomedical engineering, such as refining the understanding of complex diseases, including cancer and neurodegenerative and psychiatric disorders. Advances in this field could eventually lead to the development of precision medicine and automated diagnostic tools capable of tailoring medical treatments to individual lifestyles, variability, and the environment. Highlights include: Artificial Intelligence in treating and diagnosing schizophrenia An analysis of ML’s and DL’s financial effect on healthcare An XGBoost-based classification method for breast cancer classification Using ML to predict squamous diseases ML and DL applications in genomics and proteomics Applying ML and DL to biological data

The automated learning of machines characterizes machine learning (ML). It focuses on making data-driven predictions using programmed algorithms. ML has several applications, including bioinformatics, which is a discipline of study and practice that deals with applying computational derivations to obtain biological data. It involves the collection, retrieval, storage, manipulation, and modeling of data for analysis or prediction made using customized software. Previously, comprehensive programming of bioinformatical algorithms was an extremely laborious task for such applications as predicting protein structures. Now, algorithms using ML and deep learning (DL) have increased the speed and efficacy of programming such algorithms. Applications of Machine Learning and Deep Learning on Biological Data is an examination of applying ML and DL to such areas as proteomics, genomics, microarrays, text mining, and systems biology. The key objective is to cover ML applications to biological science problems, focusing on problems related to bioinformatics. The book looks at cutting-edge research topics and methodologies in ML applied to the rapidly advancing discipline of bioinformatics. ML and DL applied to biological and neuroimaging data can open new frontiers for biomedical engineering, such as refining the understanding of complex diseases, including cancer and neurodegenerative and psychiatric disorders. Advances in this field could eventually lead to the development of precision medicine and automated diagnostic tools capable of tailoring medical treatments to individual lifestyles, variability, and the environment. Highlights include: Artificial Intelligence in treating and diagnosing schizophrenia An analysis of ML’s and DL’s financial effect on healthcare An XGBoost-based classification method for breast cancer classification Using ML to predict squamous diseases ML and DL applications in genomics and proteomics Applying ML and DL to biological data

Artificial Intelligence (AI) is an extensive concept that can be interpreted as a concentration on designing computer programs to train machines to accomplish functions like or better than hu-mans. An important subset of AI is Machine Learning (ML), in which a computer is provided with the capacity to learn its own patterns instead of the patterns and restrictions set by a human programmer, thus improving from experience. Deep Learning (DL), as a class of ML techniques, employs multilayered neural networks. The application of AI to plant science research is new and has grown significantly in recent years due to developments in calculation power, proficien-cies of hardware, and software progress. AI algorithms try to provide classifications and predic-tions. As applied to plant breeding, particularly omics data, ML as a given AI algorithm tries to translate omics data, which are intricate and include nonlinear interactions, into precise plant breeding. The applications of AI are extending rapidly and enhancing intensely in sophistication owing to the capability of rapid processing of huge and heterogeneous data. The conversion of AI techniques into accurate plant breeding is of great importance and will play a key role in the new era of plant breeding techniques in the coming years, particularly multi-omics data analysis. Advancements in plant breeding mainly depend upon developing statistical methods that harness the complicated data provided by analytical technologies identifying and quantifying genes, transcripts, proteins, metabolites, etc. The systems biology approach used in plant breeding, which integrates genomics, transcriptomics, proteomics, metabolomics, and other omics data, provides a massive amount of information. It is essential to perform accurate statistical analyses and AI methods such as ML and DL as well as optimization techniques to not only achieve an understanding of networks regulation and plant cell functions but develop high-precision models to predict the reaction of new Genetically Modified (GM) plants in special conditions. The constructed models will be of great economic importance, significantly reducing the time, labor, and instrument costs when finding optimized conditions for the bio-exploitation of plants. This Research Topic covers a wide range of studies on artificial intelligence-assisted plant breeding techniques, which contribute to plant biology and plant omics research. The relevant sub-topics include, but are not restricted to, the following: • AI-assisted plant breeding using omics and multi-omics approaches • Applying AI techniques along with multi-omics to recognize novel biomarkers associated with plant biological activities • Constructing up-to-date ML modeling and analyzing methods for dealing with omics data related to different plant growth processes • AI-assisted omics techniques in the plant defense process • Combining AI-assisted omics and multi-omics techniques using plant system biology approaches • Combining bioinformatics tools with AI approaches to analyze plant omics data • Designing cutting-edge workflow and developing innovative AI biology methods for omics data analysis

The pathogenic microbiome is the community of microorganisms that live in humans or animals and cause disease. These microorganisms include bacteria, viruses, fungi, protozoa, etc. They usually live in the host's skin, mouth, intestinal tract, genitourinary tract, etc. Normally, there is a state of equilibrium between the host and these microorganisms, but when this equilibrium is disturbed, these microorganisms become the pathogenic microbiome and cause disease. To advance the field of microbiome research, artificial intelligence methods, especially machine learning and deep learning, have recently been used as important tools due to their powerful predictive and informative potential. Classical machine learning algorithms such as linear regression, random forests, support vector machines, etc. perform well on microbiome data. However, as algorithms have been iteratively updated, these models have long been relegated to the basics. Linear regression models are now more often used to interpret these models more intuitively by using the output of other models as input. Deep learning is a branch of machine learning that involves a large number of neural network structures. Deep learning relies on neurons whose role is to transform the input and propagate it forward to the next neuron. Deep learning is currently being used with spectacular success in areas such as image recognition, text processing and automatic translation. As a result, a growing number of researchers are attempting to apply deep learning techniques to biomedical data analysis. Although there are still challenges in practical applications, such as model interpretability, data availability, model evaluation and selection, machine learning and deep learning are very promising tools in pathogenic microbiome research. This Research Topic, therefore, aims to contribute to the latest advances in machine learning, especially deep learning, and to explore new applications of related techniques in pathogenic microbiome research, trying to find relationships between microbiome and human health as well as the environment by studying high-throughput sequencing data of microbes, laying the foundation for further applications for subsequent treatment or forensic identification. We welcome submissions of Original Research, Brief Research Report, Review, Mini-Review, Methods, Perspective and Opinion articles that focus on, but are not limited to, the utilization of machine learning and deep learning to address the following subtopics. 1. Classification and identification of pathogenic microorganisms 2. Virulence prediction of pathogenic microorganisms 3. Antimicrobial resistance prediction of pathogenic microorganisms 4. Population structure and epidemiology of pathogenic microorganisms-related diseases 5. Immunological studies of pathogenic microorganisms 6. Drug target prediction for pathogenic microorganisms-related diseases

This book discusses topics related to bioinformatics, statistics, and machine learning, presenting the latest research in various areas of bioinformatics. It also highlights the role of computing and machine learning in knowledge extraction from biological data, and how this knowledge can be applied in fields such as drug design, health supplements, gene therapy, proteomics and agriculture.

In the evolving environment of bioinformatics, genomics, and computational biology, academic scholars are facing a challenging challenge – keeping informed about the latest research trends and findings. With unprecedented advancements in sequencing technologies, computational algorithms, and machine learning, these fields have become indispensable tools for drug discovery, disease research, genome sequencing, and more. As scholars strive to decode the language of DNA, predict protein structures, and navigate the complexities of biological data analysis, the need for a comprehensive and up-to-date resource becomes paramount. The Research Anthology on Bioinformatics, Genomics, and Computational Biology is a collection of a carefully curated selection of chapters that serves as the solution to the pressing challenge of keeping pace with the dynamic advancements in these critical disciplines. This anthology is designed to address the informational gap by providing scholars with a consolidated and authoritative source that sheds light on critical issues, innovative theories, and transformative developments in the field. It acts as a single reference point, offering insights into conceptual, methodological, technical, and managerial issues while also providing a glimpse into emerging trends and future opportunities.

Advances in high-throughput biological methods have led to the publication of a large number of genome-wide studies in human and animal models. In this context, recent tools from bioinformatics and computational biology have been fundamental for the analysis of these genomic studies. The book Bioinformatics and Human Genomics Research provides updated and comprehensive information about multiple approaches of the application of bioinformatic tools to research in human genomics. It covers strategies analysis of genome-wide association studies, genome-wide expression studies and genome-wide DNA methylation, among other topics. It provides interesting strategies for data mining in human genomics, network analysis, prediction of binding sites for miRNAs and transcription factors, among other themes. Experts from all around the world in bioinformatics and human genomics have contributed chapters in this book. Readers will find this book as quite useful for their in silico explorations, which would contribute to a better and deeper understanding of multiple biological processes and of pathophysiology of many human diseases.

The book analyzes the combination of intelligent data analytics with the intricacies of biological data that has become a crucial factor for innovation and growth in the fast-changing field of bioinformatics and biomedical systems. Intelligent Data Analytics for Bioinformatics and Biomedical Systems delves into the transformative nature of data analytics for bioinformatics and biomedical research. It offers a thorough examination of advanced techniques, methodologies, and applications that utilize intelligence to improve results in the healthcare sector. With the exponential growth of data in these domains, the book explores how computational intelligence and advanced analytic techniques can be harnessed to extract insights, drive informed decisions, and unlock hidden patterns from vast datasets. From genomic analysis to disease diagnostics and personalized medicine, the book aims to showcase intelligent approaches that enable researchers, clinicians, and data scientists to unravel complex biological processes and make significant strides in understanding human health and diseases. This book is divided into three sections, each focusing on computational intelligence and data sets in biomedical systems. The first section discusses the fundamental concepts of computational intelligence and big data in the context of bioinformatics. This section emphasizes data mining, pattern recognition, and knowledge discovery for bioinformatics applications. The second part talks about computational intelligence and big data in biomedical systems. Based on how these advanced techniques are utilized in the system, this section discusses how personalized medicine and precision healthcare enable treatment based on individual data and genetic profiles. The last section investigates the challenges and future directions of computational intelligence and big data in bioinformatics and biomedical systems. This section concludes with discussions on the potential impact of computational intelligence on addressing global healthcare challenges. Audience Intelligent Data Analytics for Bioinformatics and Biomedical Systems is primarily targeted to professionals and researchers in bioinformatics, genetics, molecular biology, biomedical engineering, and healthcare. The book will also suit academicians, students, and professionals working in pharmaceuticals and interpreting biomedical data.

Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities is an invaluable resource for general and applied researchers who analyze biological data that is generated, at an unprecedented rate, at the global level. After careful evaluation of the requirements for current trends in bioinformatics and computational biology, it is anticipated that the book will provide an insightful resource to the academic and scientific community. Through a myriad of computational resources, algorithms, and methods, it equips readers with the confidence to both analyze biological data and estimate predictions. The book offers comprehensive coverage of the most essential and emerging topics: Cloud-based monitoring of bioinformatics multivariate data with cloud platforms Machine learning and deep learning in bioinformatics Quantum machine learning for biological applications Integrating machine learning strategies with multiomics to augment prognosis in chronic diseases Biomedical engineering Next generation sequencing techniques and applications Computational systems biology and molecular evolution While other books may touch on some of the same issues and nuances of biological data analysis, they neglect to feature bioinformatics and computational biology exclusively, and as exhaustively. This book's abundance of several subtopics related to almost all of the regulatory activities of biomolecules from where real data is being generated brings an added dimension.

In the relentless battle against escalating cyber threats, data security faces a critical challenge – the need for innovative solutions to fortify encryption and decryption processes. The increasing frequency and complexity of cyber-attacks demand a dynamic approach, and this is where the intersection of cryptography and machine learning emerges as a powerful ally. As hackers become more adept at exploiting vulnerabilities, the book stands as a beacon of insight, addressing the urgent need to leverage machine learning techniques in cryptography. Machine Learning and Cryptographic Solutions for Data Protection and Network Security unveil the intricate relationship between data security and machine learning and provide a roadmap for implementing these cutting-edge techniques in the field. The book equips specialists, academics, and students in cryptography, machine learning, and network security with the tools to enhance encryption and decryption procedures by offering theoretical frameworks and the latest empirical research findings. Its pages unfold a narrative of collaboration and cross-pollination of ideas, showcasing how machine learning can be harnessed to sift through vast datasets, identify network weak points, and predict future cyber threats.